Pierce, Niles A.
Advisor — 19 thesises
- Othmer, Jonathan Andrew — Algorithms for Mapping Nucleic Acid Free Energy Landscapes (2009, Dissertation (Ph.D.))
- Zadeh, Joseph N. — Algorithms for Nucleic Acid Sequence Design (2010, Dissertation (Ph.D.))
- Bois, Justin S. — Analysis of Interacting Nucleic Acids in Dilute Solutions (2007, Dissertation (Ph.D.))
- Dirks, Robert Michael — Analysis, Design, and Construction of Nucleic Acid Devices (2005, Dissertation (Ph.D.))
- Huang, Jining — Applications of Dynamic Nucleic Acid Nanotechnology in Closed-Loop Genetic Circuits and Detection of Viral Pathogens (2023, Dissertation (Ph.D.))
- Fornace, Mark Evan — Computational Methods for Simulating and Parameterizing Nucleic Acid Secondary Structure Thermodynamics and Kinetics (2022, Dissertation (Ph.D.))
- Hanewich-Hollatz, Mikhail Henning — Conditional Guide RNAs: Programmable Conditional Regulation of CRISPR/Cas Function via Dynamic RNA Nanotechnology (2020, Dissertation (Ph.D.))
- Wolfe, Brian Robert — Design and Analysis of Nucleic Acid Reaction Pathways (2014, Dissertation (Ph.D.))
- Chen, Zhewei — Engineering Conditional Guide RNAs for Cell-Selective Regulation of CRISPR/Cas9 (2023, Dissertation (Ph.D.))
- Schwarzkopf, Ma'ayan — Engineering Nucleic Acid Mechanisms for Regulation and Readout of Gene Expression: Conditional Dicer Substrate Formation and Sensitive Multiplexed Northern Blots (2013, Dissertation (Ph.D.))
- Porubsky, Nicholas James — Enhanced Algorithms for Analysis and Design of Nucleic Acid Reaction Pathways (2020, Dissertation (Ph.D.))
- Guareschi, Matteo Michele — Enriching Architectures for Biosensing and Motor-Filament Systems Through the Programmability of DNA (2025, Dissertation (Ph.D.))
- Trivedi, Vikas — From Molecules to Organs : Microscopy and Multi-Scale Nature of Development (2015, Dissertation (Ph.D.))
- Husain, Naeem Shahab — Mapping mRNA and Protein Expression with High Signal-to-Background in Diverse Organisms (2016, Dissertation (Ph.D.))
- Acharya, Aneesh — Multiplexed Analysis of Diverse RNA Classes via Hybridization Chain Reaction (2016, Dissertation (Ph.D.))
- Schulte, Samuel Jordan — New HCR Technologies: 10-Plex Quantitative Spectral Imaging of RNAs and Proteins; Multiplexed Quantitative Imaging of Protein:Protein Complexes; and Sensitive, Instrument-Free, At-Home Pathogen Detection (2023, Dissertation (Ph.D.))
- Choi, Harry Ming Tak — Programmable In Situ Amplification for Multiplexed Bioimaging (2010, Dissertation (Ph.D.))
- Hochrein, Lisa Marie — Towards Conditional RNAi : Shape and Sequence Transduction with Small Conditional RNAs (2013, Dissertation (Ph.D.))
- Sternberg, Jonathan Ben-Zion — Signal Transduction with Hybridization Chain Reactions (2013, Dissertation (Ph.D.))