Winfree, Erik

Advisor — 14 thesises

• Franco, Elisa — Analysis, Design, and in vitro Implementation of Robust Biochemical Networks (2012, Dissertation (Ph.D.))
• Ortiz-Muñoz, Andrés — Combinatorics and Stochasticity for Chemical Reaction Networks (2022, Dissertation (Ph.D.))
• Poole, William — Compilation and Inference with Chemical Reaction Networks (2022, Dissertation (Ph.D.))
• Shin, Seung Woo — Compiling and Verifying DNA-Based Chemical Reaction Network Implementations (2012, Master's thesis)
• Evans, Constantine Glen — Crystals that Count! Physical Principles and Experimental Investigations of DNA Tile Self-Assembly (2014, Dissertation (Ph.D.))
• Zhang, David Yu — Dynamic DNA Strand Displacement Circuits (2010, Dissertation (Ph.D.))
• Johnson, Robert Francis — Formal Design and Analysis for DNA Implementations of Chemical Reaction Networks (2020, Dissertation (Ph.D.))
• Kim, Jongmin — In Vitro Synthetic Transcriptional Networks (2007, Dissertation (Ph.D.))
• Soloveichik, David — Molecules Computing: Self-Assembled Nanostructures, Molecular Automata,and Chemical Reaction Networks (2008, Dissertation (Ph.D.))
• Hariadi, Rizal Fajar — Non-Equilibrium Dynamics of DNA Nanotubes (2011, Dissertation (Ph.D.))
• Srinivas, Niranjan — Programming Chemical Kinetics: Engineering Dynamic Reaction Networks with DNA Strand Displacement (2015, Dissertation (Ph.D.))
• Schaeffer, Joseph Malcolm — Stochastic Simulation of the Kinetics of Multiple Interacting Nucleic Acid Strands (2013, Dissertation (Ph.D.))
• Schaeffer, Joseph Malcolm — The Multistrand Simulator: Stochastic Simulation of the Kinetics of Multiple Interacting DNA Strands (2012, Master's thesis)
• Schulman, Rebecca Beth — The Self-Replication and Evolution of DNA Crystals (2007, Dissertation (Ph.D.))