Bois, Justin S.

Committee Member — 19 thesises

• Fang, Meichen — A Biophysical Approach to Normalization and Trajectory Inference in Single-Cell RNA Sequencing Data Analysis (2025, Dissertation (Ph.D.))
• Johnston, Kadina Elizabeth — Acquiring Enzyme Sequence-Fitness Data at Scale Toward Predictive Methods for Enzyme Engineering (2024, Dissertation (Ph.D.))
• Olsman, Noah Andrew — Architecture, Design, and Tradeoffs in Biomolecular Feedback Systems (2019, Dissertation (Ph.D.))
• Ortiz-Muñoz, Andrés — Combinatorics and Stochasticity for Chemical Reaction Networks (2022, Dissertation (Ph.D.))
• Williams, Rory Logan — Development and Scaling of Differentiation Circuit Architectures for Improving the Evolutionary Stability of Burdensome Functions in E. coli (2022, Dissertation (Ph.D.))
• Caldera, Luis Fernando — Engineering Immunological Solutions for Pandemic-Level Threats (2026, Dissertation (Ph.D.))
• Goertsen, David Gerald — Expanding Adeno-Associated Viral Capsid Engineering to Multiple Variable Regions for Diversified Tropism (2023, Dissertation (Ph.D.))
• Knight, Anders Matthew — Expanding the Scope of Metalloprotein Families and Substrate Classes in New-to-Nature Reactions (2021, Dissertation (Ph.D.))
• Banks, Rachel A. — Experimental and Theoretical Studies of Non-Equilibrium Systems: Motor-Microtubule Assemblies and the Human-Earth System (2022, Dissertation (Ph.D.))
• Röschinger, Tom — Illuminating the Regulatory Dark Matter of E. coli with Massively Parallel Reporter Assays (2026, Dissertation (Ph.D.))
• Ivy, Tobin William — Implementing and Modeling Gene Drives for Population Modification and Suppression (2024, Dissertation (Ph.D.))
• Markarian, Nicholas — Mixtures of Latent Variable Models for Interpreting Gene Expression Covariation from Pathways to Transcriptomes (2026, Dissertation (Ph.D.))
• Bhamidipati, Pranav Subramanyam — Modeling and Design of Synthetic Biochemical Circuits for Biological Phenotypes (2024, Dissertation (Ph.D.))
• Kratz, Matthieu Francois — Naturally-Inspired Circuits for Microbial Composition Control and Biosensing (2026, Dissertation (Ph.D.))
• McGehee, James Mitchell — Optogenetic Approaches for Determining the Temporal Role of Morphogen Inputs on Target Gene Expression (2023, Dissertation (Ph.D.))
• Parkin, James Michael — Signal Amplification in Synthetic Bacterial Communication (2021, Dissertation (Ph.D.))
• Einav, Tal — Taming the Molecular Dance: Harnessing Statistical Mechanics to Quantitatively Characterize Allosteric Systems (2019, Dissertation (Ph.D.))
• Ciemniecki, John Alan — The Bioenergetics of a Low-Power, Phenazine-Dependent Maintenance Metabolism in Pseudomonas aeruginosa (2024, Dissertation (Ph.D.))
• Tsypin, Lev Maximovich — The Discovery and Biological Mechanisms of a Widespread Phenazine's Oxidation (2023, Dissertation (Ph.D.))