Cai, Long

Committee Member — 40 thesises

• Liaw, Eric Jer-Jiun — A Novel, Rapid Phenotypic Assay for a Beta-Lactam Antibiotic Susceptibility and an Analysis of its Theoretical Limits (2023, Dissertation (Ph.D.))
• Schwartz, Morgan Sarah — Accelerating Biological Discovery with Deep Learning and Spatial Optical Barcodes (2024, Dissertation (Ph.D.))
• Chen, Xiaoqiao — Active Acquisition Methods for Single Cell Genomics (2025, Dissertation (Ph.D.))
• Lovely, Geoffrey A. — Biophysics of V(D)J Recombination and Genome Packaging: In Singulo Studies on RAG, HMGB1, and TFAM (2014, Dissertation (Ph.D.))
• Hwang, Kiwook — Biotechnologies for Cancer Diagnostics: Cell Sorting, Protein Analysis and Imaging of Cellular Metabolism (2013, Dissertation (Ph.D.))
• Chakravorty, Arun — Bridging Space and Time: Resolving the Temporal Dynamics of the Seminiferous Epithelial Cycle Using Spatial Transcriptomics (2025, Dissertation (Ph.D.))
• Du, Rongrong — Build Synthetic Circuits at Different Scales (2026, Dissertation (Ph.D.))
• Bui, Thinh Quoc — Cavity Enhanced Spectroscopies for Applications of Remote Sensing, Chemical Kinetics and Detection of Radical Species (2015, Dissertation (Ph.D.))
• Stone, Shannon Elizabeth — Cell-Selective Chemoproteomics for Biological Discovery (2018, Dissertation (Ph.D.))
• Ou, Xiaoze — Computational Microscopy: Breaking the Limit of Conventional Optics (2016, Dissertation (Ph.D.))
• Davis, Matthew Robert — Computational Studies of Noncovalent Interactions in Ligand-Gated Ion Channels – and - Synthesis and Characterization of Red and Near Infrared Cyanine Dyes (2018, Dissertation (Ph.D.))
• Pang Wan Rion, Marion — Deep Profiling of the Single-Cell Proteome (2026, Dissertation (Ph.D.))
• Nag, Arundhati — Developing Peptide Based Capture Agents for Diagnostics and Therapeutics (2013, Dissertation (Ph.D.))
• Arrastia, Mary Villanueva — Development of Single-Cell SPRITE: a Tool for Measuring Heterogeneity of 3D DNA Organization (2022, Dissertation (Ph.D.))
• Segal, Helen Muriel — Electrochemical Methods to Study Iron-Sulfur Cluster Proteins (2016, Dissertation (Ph.D.))
• Chan, Ken Yee — Engineered Viral Vectors and Developed Tissue Clearing Methods for Single-cell Phenotyping in Whole Organs (2017, Dissertation (Ph.D.))
• Mertens, Laura Anna — Experiments on Gas Phase Chemistry with High Sensitivity Laser Spectroscopy (2017, Dissertation (Ph.D.))
• Yang, Yujing — Exploring Cell Diversity in Complex Tissues through Spatial Genomics and Spatial Transcriptomics (2025, Dissertation (Ph.D.))
• Chadly, Duncan Matthew — High-Resolution Phylogenetic Lineage Recording with CRISPR Base Editors (2026, Dissertation (Ph.D.))
• Zhang, Yandong — Highly Multiplexed Imaging of E. Coli Chromosome and Sensitive Detection of Single-Cell Protein (2019, Dissertation (Ph.D.))
• Shah, Sheel Mukesh — Highly Multiplexed Single Cell In Situ RNA Detection (2017, Dissertation (Ph.D.))
• Kishi, Yuriko — Hox-Mediated Evolution of a Novel Cell Type in Rove Beetles (2027, Dissertation (Ph.D.))
• Edmonds, KeHuan Kuo — Imaging Cell Lineage with a Synthetic Digital Recording System (2022, Dissertation (Ph.D.))
• Colón, Katsuya Lex — In Situ Signal Amplification for Spatial Transcriptomics Using Programmable DNA Assemblies (2025, Dissertation (Ph.D.))
• Takei, Yodai — Integrated Spatial Genomics Reveals Organizational Principles of Single-Cell Nuclear Architecture (2021, Dissertation (Ph.D.))
• Husain, Naeem Shahab — Mapping mRNA and Protein Expression with High Signal-to-Background in Diverse Organisms (2016, Dissertation (Ph.D.))
• Sun, Bing — Mechanistic Studies of Reactions at the Single-Molecule Level using Microfluidics with Applications in Molecular Diagnostics (2014, Dissertation (Ph.D.))
• Singer, Zakary Sean — Metastability and Dynamics of Stem Cells: From Direct Observations to Inference at the Single Cell Level (2015, Dissertation (Ph.D.))
• Selck, David Anthony — Microfluidics for Molecular Measurements and Quantitative Distributable Diagnostics (2017, Dissertation (Ph.D.))
• Letsou, William Peter — Noncommutative Biology: Sequential Regulation of Complex Networks and Connected Matter (2018, Dissertation (Ph.D.))
• Zhou, Edward Haojiang — Optical Focusing and Imaging through Scattering Media (2017, Dissertation (Ph.D.))
• Eng, Chee Huat (Linus) — Plus Ultra: Genome-Wide Spatial Transcriptomics with RNA seqFISH+ (2021, Dissertation (Ph.D.))
• Barlow, Jacob T. — Quantitative Sequencing and its Application to Studies of the Human Small-Intestine Microbiota (2022, Dissertation (Ph.D.))
• Zhou, Wen — Single-Cell Analysis of Normal and Perturbed Early T-Cell Developmental Processes (2021, Dissertation (Ph.D.))
• Perez, Kathryn A. — Structural and Biochemical Characterization of Ligand Bound States of the FeMo-Cofactor of Nitrogenase (2016, Dissertation (Ph.D.))
• Chen, Yi-Ju — The Mechanical Genome in Regulation and Infection (2015, Dissertation (Ph.D.))
• Wang, Zitong (Jerry) — Theoretical and Computational Analysis of Cell Migration in Complex Tissue Environments (2025, Dissertation (Ph.D.))
• Lubeck, Eric — Towards in situ Single Cell Systems Biology (2016, Dissertation (Ph.D.))
• White, Jonathan Alexander — Untangling Overlapping Barcodes in Image-Based Spatial Genomics (2026, Dissertation (Ph.D.))
• Minor, Paul Joseph — Wnt and FGF Signaling in C. elegans Vulval Cell Lineage Polarity (2014, Dissertation (Ph.D.))